电化学生物传感器 2012

Electrochemical DNA biosensor for detecting cancer biomarker related to glutathione S-transferase P1 (GSTP1) hypermethylation in real samples.

Biosensors & bioelectronics Topkaya SN, Ozkan-Ariksoysal D, Kosova B, Ozel R, Ozsoz M
阅读原文 PDF DOI PubMed

组成图示

Electrochemical DNA biosensor for det... 传感器构成示意图

点击图片查看大图 · 依据论文自动绘制

传感器类型

电化学生物传感器

检测对象

GSTP1启动子高甲基化DNA(GSTP1 promoter hypermethylation)、未甲基化GSTP1 DNA;样品基质为血浆无细胞DNA经亚硫酸氢盐转化和MSP-PCR扩增后的变性PCR产物,另用合成寡核苷酸验证。

检测原理

该传感器为无标记电化学基因传感器。GSTP1甲基化特异性或未甲基化DNA捕获探针通过物理吸附固定于铅笔石墨电极表面。经亚硫酸氢盐转化和MSP-PCR扩增后的变性靶标与探针杂交形成双链。DPV模式下,双链形成使探针中鸟嘌呤碱基被屏蔽,难以在+1.0 V附近氧化,导致鸟嘌呤氧化峰电流下降;未杂交探针峰电流较高。EIS模式下,双链DNA增加界面负电荷并阻碍Fe(CN)6^3-/4-向电极表面扩散,使电荷转移电阻Rct增大。信号变化反映杂交程度,从而指示GSTP1高甲基化状态。MSP-PCR在样品前处理中扩增靶标,提高可检测量。

检测灵敏度

LOD: 2.92 pmol of target sequence in a 100-µl reaction volume (S/N = 3);优化后未甲基化GSTP1序列检出限:probe 5 µg/ml、target 7 µg/ml (S/N = 3)

效应效果

传感器对互补靶标与非互补序列具有良好区分能力:非互补PCR产物及甲基化/未甲基化交叉反应体系的阻抗低于完全匹配杂交体系,DPV鸟嘌呤信号与未杂交探针相近;溶液相杂交可使甲基化特异性序列的鸟嘌呤信号下降约50%。重复测量相对标准偏差(RSD)为甲基化特异性探针/杂交8.1%和8.2%,未甲基化探针/杂交5.1%和8.3%。实际血浆无细胞DNA经MSP-PCR扩增后的检测结果与琼脂糖凝胶电泳一致,可区分GSTP1高甲基化阳性、阴性及阴性对照。作者认为该方法比传统凝胶电泳和光学方法更快速、简单、无放射性且成本更低,适合前列腺癌筛查和临床诊断。

传感器的构成

  • 基底/换能器:一次性铅笔石墨电极(PGE),作为探针吸附与电化学换能的工作电极
  • 三电极体系:Ag/AgCl参比电极与铂丝辅助电极,构成DPV/EIS测量回路
  • 识别元件:甲基化特异性/未甲基化GSTP1 DNA捕获探针(M-prob/U-prob),物理吸附于PGE表面并与互补靶标杂交
  • 信号标记物:无标记;直接检测DNA鸟嘌呤氧化信号(DPV)及Fe(CN)6^3-/4-氧化还原探针(EIS)
  • 反应介质:PBS(pH 7.4)用于探针/靶标混合与杂交;ACB(0.5 M醋酸缓冲液含20 mM NaCl,pH 4.8)用于DPV鸟嘌呤氧化

中文摘要

本文报道了一种用于检测谷胱甘肽S-转移酶P1(GSTP1)基因高甲基化的电化学基因传感器。GSTP1启动子高甲基化是前列腺癌的特异性DNA标志物。该传感器采用一次性碳石墨工作电极,并结合差分脉冲伏安法(DPV),通过比较探针与合成靶标或变性PCR样品杂交前后在+1.0 V附近的鸟嘌呤氧化信号来判定杂交事件。同时,以铁氰化钾/亚铁氰化钾为氧化还原探针,用电化学阻抗谱(EIS)表征DNA杂交。检测流程包括两种模式:(i)将选择性识别甲基化特异性和未甲基化GSTP1序列的捕获探针直接固定于电极表面,并在电极表面完成杂交;(ii)将探针与靶标或非互补靶标在溶液中混合,再通过简单吸附修饰换能器。在100 µL反应体积中,以信噪比S/N=3计算,检出限为2.92 pmol靶标序列。文章还给出了传感器的最佳分析检测参数及其未来应用前景。

英文摘要

An electrochemical genosensor for the detection of hypermethylation of the glutathione S-transferase P1 (GSTP1) gene, a specific marker of prostate cancer, was reported. This new sensor was used in combination with a single-use carbon graphite working electrode and differential pulse voltammetry, with the results of sample analysis based on the guanine oxidation signals obtained at +1.0 V before and after hybridization between probe and synthetic target or denatured PCR samples. The detected DNA hybridization was also characterized by electrochemical impedance spectroscopy with potassium ferri/ferrocyanide as a redox probe. The protocol consisted of 2 different modes: (i) capture probes selective for methylation-specific and unmethylated GSTP1 sequences were immobilized onto the sensor directly, and hybridization was formed on the electrode surface; (ii) probe/target or probe/noncomplementary target couples were mixed in solution phase, and the transducer was modified through simple adsorption. The limit of detection (S/N=3) was calculated as 2.92 pmol of target sequence in a 100-μl reaction volume. The optimum analytical detection parameters for the biosensor, as well as its future prospects, were also presented.