表面等离子共振(SPR)生物传感器 2009

A global benchmark study using affinity-based biosensors.

Analytical biochemistry Rich RL, Papalia GA, Flynn PJ, Furneisen J, Quinn J, Klein JS, Katsamba PS, Waddell MB, Scott M, Thompson J, Berlier J, Corry S, Baltzinger M, Zeder-Lutz G, Schoenemann A, Clabbers A, Wieckowski S, Murphy MM, Page P, Ryan TE, Duffner J, Ganguly T, Corbin J, Gautam S, Anderluh G, Bavdek A, Reichmann D, Yadav SP, Hommema E, Pol E, Drake A, Klakamp S, Chapman T, Kernaghan D, Miller K, Schuman J, Lindquist K, Herlihy K, Murphy MB, Bohnsack R, Andrien B, Brandani P, Terwey D, Millican R, Darling RJ, Wang L, Carter Q, Dotzlaf J, Lopez-Sagaseta J, Campbell I, Torreri P, Hoos S, England P, Liu Y, Abdiche Y, Malashock D, Pinkerton A, Wong M, Lafer E, Hinck C, Thompson K, Primo CD, Joyce A, Brooks J, Torta F, Bagge Hagel AB, Krarup J, Pass J, Ferreira M, Shikov S, Mikolajczyk M, Abe Y, Barbato G, Giannetti AM, Krishnamoorthy G, Beusink B, Satpaev D, Tsang T, Fang E, Partridge J, Brohawn S, Horn J, Pritsch O, Obal G, Nilapwar S, Busby B, Gutierrez-Sanchez G, Gupta RD, Canepa S, Witte K, Nikolovska-Coleska Z, Cho YH, D'Agata R, Schlick K, Calvert R, Munoz EM, Hernaiz MJ, Bravman T, Dines M, Yang MH, Puskas A, Boni E, Li J, Wear M, Grinberg A, Baardsnes J, Dolezal O, Gainey M, Anderson H, Peng J, Lewis M, Spies P, Trinh Q, Bibikov S, Raymond J, Yousef M, Chandrasekaran V, Feng Y, Emerick A, Mundodo S, Guimaraes R, McGirr K, Li YJ, Hughes H, Mantz H, Skrabana R, Witmer M, Ballard J, Martin L, Skladal P, Korza G, Laird-Offringa I, Lee CS, Khadir A, Podlaski F, Neuner P, Rothacker J, Rafique A, Dankbar N, Kainz P, Gedig E, Vuyisich M, Boozer C, Ly N, Toews M, Uren A, Kalyuzhniy O, Lewis K, Chomey E, Pak BJ, Myszka DG
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组成图示

A global benchmark study using affini... 传感器构成示意图

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传感器类型

表面等离子共振(SPR)生物传感器

检测对象

Fab 片段(Fab)、谷胱甘肽S-转移酶标记抗原(GST–Ag);样品基质:HBS-P 缓冲液(10 mM Hepes、150 mM NaCl、0.005% Tween 20,pH 7.4,含 0.1 mg/mL BSA)

检测原理

该研究采用亲和生物传感器测定 Fab 与 GST–Ag 的相互作用。金膜或各厂商传感表面经氨基活化、葡聚糖/海藻酸/PEG 涂层或抗体/链霉亲和素捕获固定一种蛋白作为配体;另一种蛋白作为分析物以不同浓度流过或浸入表面。特异性结合使界面质量/折射率增加,改变表面等离子共振角或光学/声学响应,仪器记录共振单位(RU)随时间变化。结合相斜率反映结合速率常数 ka,解离相衰减反映解离速率常数 kd,二者比值给出平衡解离常数 KD。该体系无酶催化或核酸放大,信号直接来自无标记蛋白结合质量变化;通过多浓度系列和重复注入评估质量传递、表面拥挤与基线漂移。

检测灵敏度

原文未报告 LOD、线性范围、灵敏度斜率或相关系数;报告动力学参数:ka = (1.4 ± 1.3) × 10^5 M^-1 s^-1;kd = (6.1 ± 8.7) × 10^-5 s^-1;KD = 0.62 ± 0.98 nM;平均亲和力 620 pM,标准差 980 pM。

效应效果

研究覆盖20个国家150名参与者、多种平台,共获得259组数据集,除1组外均可解释;94%的数据集包含模型拟合叠加图。剔除5组严重离群数据后,253组数据给出平均 KD 为0.62±0.98 nM,ka 为(1.4±1.3)×10^5 M^-1 s^-1,kd 为(6.1±8.7)×10^-5 s^-1。65%参与者至少对一个浓度做重复,多数为双重复或三重复,用于评估稳定性与再生条件。结果显示动力学参数与固定蛋白、固定方式、实验格式及平台基本无关;离群主要来自基线漂移、解离时间不足或仅收集结合相。作者认为适当设计可保证亲和生物传感器动力学测定可靠。

传感器的构成

  • 基底/换能器:金膜传感器芯片(gold sensor chip)或各厂商流池,提供 SPR/光学/声学换能基础
  • 表面修饰层:氨基活化金表面、葡聚糖(dextran)、海藻酸(alginate)或聚乙二醇(PEG)涂层,用于配体固定并降低非特异结合
  • 识别元件:GST 标记抗原(GST–Ag)或 Fab 片段作为表面配体,通过氨基偶联、抗体捕获(anti-GST/anti-Fab)、直接吸附或链霉亲和素(streptavidin)固定
  • 分析物:溶液中的 Fab 或 GST–Ag,与表面配体特异性结合
  • 信号标记物:无外源标记,结合蛋白质量变化直接产生 SPR/光学/声学信号
  • 读出层:Biacore、Bio-Rad ProteOn、ForteBio Octet 等仪器记录共振单位(RU)或相应响应

中文摘要

为探究生物传感器研究中的变异性,作者向来自20个国家的150名参与者提供相同蛋白样品,要求其测定蛋白相互作用的动力学速率常数。所选体系为50 kDa Fab片段与60 kDa谷胱甘肽S-转移酶(GST)标记抗原,二者形成较高亲和力复合物,适合不同生物传感器平台及不同经验水平用户分析。参与者需自行优化配体固定、再生条件、分析物浓度以及注入/解离时间等参数。多数参与者获得可拟合动力学参数的结合响应,但少数数据集质量可通过优化实验设计提高。剔除离群值后,剩余参与者报告的平衡解离常数平均值为620 pM,标准差为980 pM。结果表明,当生物传感器实验设计并执行适当时,所报告速率常数具有较好一致性,且与固定蛋白种类及所用生物传感器平台无关。

英文摘要

To explore the variability in biosensor studies, 150 participants from 20 countries were given the same protein samples and asked to determine kinetic rate constants for the interaction. We chose a protein system that was amenable to analysis using different biosensor platforms as well as by users of different expertise levels. The two proteins (a 50-kDa Fab and a 60-kDa glutathione S-transferase [GST] antigen) form a relatively high-affinity complex, so participants needed to optimize several experimental parameters, including ligand immobilization and regeneration conditions as well as analyte concentrations and injection/dissociation times. Although most participants collected binding responses that could be fit to yield kinetic parameters, the quality of a few data sets could have been improved by optimizing the assay design. Once these outliers were removed, the average reported affinity across the remaining panel of participants was 620 pM with a standard deviation of 980 pM. These results demonstrate that when this biosensor assay was designed and executed appropriately, the reported rate constants were consistent, and independent of which protein was immobilized and which biosensor was used.

关键词

生物传感器表面等离子共振蛋白相互作用动力学测定基准研究亲和传感